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Proteins and Nucleic Acids: Atomic Compositions of Proteins
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In the questions below, I think the "did you find" might be misleading since they do not "find" hydrogen, we only state
that hydrogen is proesent. So I would either rephrase the questions to say, "Which atoms are found in... "or, to
simplify this row of questions, one could pull "Place a check next to the atoms found in... " out of the questions
and put it across the top of the row in bold, and then have the question say (for example) "...Keratin:" etc.
You can bounce this back to me to do, I just did not want to take the time if it is not a good idea.
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<p class="pagetitle"><strong>Proteins and Nucleic Acids</strong>: The Atomic Composition of Proteins</p>
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<body class="mainidea">
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<td><img src="atomMainIdea.png" width="98" height="58"></td>
<td><p class="mainidea">Proteins are made of hundreds to thousands of atoms. Yet there are only a few diferent types of atoms in each protein. Discover which ones?</p></td>
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<img width="33" src="atomsBullet.png" height="23">
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<p class="subhead">
Explore the atomic composition of proteins
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In the following window, you can compare the shapes and the atoms of four
different types of proteins. <b>What to do:</b>
<ul>
<li>
View four different proteins using the buttons above the structure.
</li>
<li>
Use the radio buttons below the structure to explore the
different elements.
</li>
<li>
Click on the window and drag to rotate the protein molecule.
</li>
<li>
Determine which atoms are in each of proteins and record your answers
in the questions below.
</li>
</ul>
</body>
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org.concord.modeler.ActivityButton
Keratin
Display the keratin protein
false
Script
org.concord.modeler.ActivityButton
Hemoglobin
Display the hemoglobin protein
false
Script
org.concord.modeler.ActivityButton
Plant toxin
Display a plant toxin protein
false
Script
org.concord.modeler.ActivityButton
Mellitin
Display the mellitin protein
false
Script
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JmolApplet.jar
netscape.jar
org.jmol.applet.MwPlugin
page2$plugin$0.aps{name="nostatepersistence" value="true"}{name="load" value="keratin.pdb"}{name="script" value="restrict none; script keratin.spt;"}
500400
Nonehttp://mw2.concord.org/public/plugin/keratin.spt, mellitin.pdb, mellitin.spt, hemoglobin.pdb, hemoglobin.spt, toxin.pdb, toxin.spt, spacefilledElem.gif, mellitin.jvxl, hemoglobin.jvxl, hemoglobin.jvxl, toxin.jvxl, keratin.jvxl
org.concord.modeler.PageTextBox
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<b>Tough and insoluble.</b> <i>Keratin</i> looks and works like a strong
fiber. It forms the beaks, claws and protective armour of animals from
dinosaurs to modern reptiles, birds, amphibians and mammals.
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<img src="colorkeyElement.gif">
</p>
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<p class="firstp">
<b>Highlight one element at a time:</b>
</p>
<p><b>
<input script="script:nativescript:plugin:1:define sg1 hydrogen and protein; script displaySg1.spt; set echo myecho 0% 100%; color echo white; font echo 12 sans bold; echo All proteins have many hydrogen atoms! |But, like these four examples, proteins are most often shown without them. |This greatly simplifies the view. " value="radio" name="RadioGroup1" type="radio">
Hydrogen*
<input script="script:nativescript:plugin:1:define sg1 carbon and protein; script displaySg1.spt" value="radio" name="RadioGroup1" type="radio"><font color="#666666">Carbon</font>
<input script="script:nativescript:plugin:1:define sg1 oxygen and protein; script displaySg1.spt" value="radio" name="RadioGroup1" type="radio"><font color="#FF0000">Oxygen</font>
<input script="script:nativescript:plugin:1:define sg1 nitrogen and protein; script displaySg1.spt" value="radio" name="RadioGroup1" type="radio"><font color="#3366CC">Nitrogen</font>
<input script="script:nativescript:plugin:1:define sg1 sulfur and protein; script displaySg1.spt" value="radio" name="RadioGroup1" type="radio"><font color="#FFCC00">Sulfur</font>
<input script="script:nativescript:plugin:1:define sg1 phosphorus and protein; script displaySg1.spt" value="radio" name="RadioGroup1" type="radio"><font color="#FF6600">Phosphorus</font>
<input script="script:nativescript:plugin:1:select all; cpk; color atoms cpk; isosurface off;" value="radio" name="RadioGroup1" type="radio" checked="checked">Reset
</p>
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<body bgcolor="rgb(230, 230, 230)" face="Arial" marginwidth="5" marginheight="5">
<b>Which atoms did you find in Keratin?</b><font size="2"> (Check all that
apply.) </font>
</body>
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true
Carbon
Hydrogen
Nitrogen
Oxygen
Sulfur
Phosphorus
0 1 2 3
-333334
Line
org.concord.modeler.PageMultipleChoice
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<body bgcolor="rgb(230, 230, 230)" face="Arial" marginwidth="5" marginheight="5">
<b>Which atoms did you find in Hemoglobin?</b> <font size="2">(Check all
that apply.) </font>
</body>
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true
Carbon
Hydrogen
Nitrogen
Oxygen
Sulfur
Phosphorus
0 1 2 3
-333334
Line
org.concord.modeler.PageMultipleChoice
false
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<body bgcolor="rgb(230, 230, 230)" face="Arial" marginwidth="5" marginheight="5">
<b>Which atoms did you find in the Plant toxin? </b><font size="2">(Check
all that apply.) </font>
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true
Carbon
Hydrogen
Nitrogen
Oxygen
Sulfur
Phosphorus
0 1 2 3
-333334
Line
org.concord.modeler.PageMultipleChoice
false
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<body bgcolor="rgb(230, 230, 230)" face="Arial" marginwidth="5" marginheight="5">
<b>Which atoms did you find in Melettin?</b><font size="2"> (Check all
that apply.) </font>
</body>
</html>
true
Carbon
Hydrogen
Nitrogen
Oxygen
Surlfur
Phosphorus
0 1 2 3
-333334
Line
org.concord.modeler.PageTextArea
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<body bgcolor="rgb(230, 230, 230)" marginwidth="5" marginheight="5">
<strong><font face="Arial, Helvetica, sans-serif" size="4">Which atoms are
found in all of the proteins?</font></strong>
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false
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