UTF-8
DNA Structure
all-off.spt, dna.spt
1
org.concord.modeler.PageTextBox
700.0
140.0
<html>
<head>
<style type="text/css">
<!--
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body.mainidea { margin-top: 5px }
p { font-size: 11px }
ul { list-style-image: file:/Users/freichsman/Documents/Projects/Concord/RITES/proposed%20activities/DNA%20structure/listBullet.png }
table p { font-size: 11px; margin-top: 11px }
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-->
</style>
</head>
<body marginheight="10" marginwidth="5">
<table width="100%" border="0" cellpadding="0">
<tr>
<td colspan="2" align="left">
<b>Show DNA as:</b>
</td>
<td colspan="2" align="left">
<b>Show or hide: </b>
</td>
<td colspan="2" align="left">
<b>Color by:</b>
</td>
<td width="3%">
 
</td>
<td align="left" width="31%">
<b>Center:</b><!--<input selfscript="selectcomponent 1 true; selectcomponent 5 true; selectcomponent 9 true; selectcomponent 13 true; selectcomponent 2 false; selectcomponent 12 false;" script="script:nativescript:plugin:1:exit; script all-off.spt; script dna.spt; " name="reset" value="Reset Model" alt="" type="submit">-->
</td>
</tr>
<tr>
<td align="right" width="4%">
<input checked="checked" value="radio" script="script:nativescript:plugin:1:script all-off.spt; cpk;" name="RadioGroup0" type="radio">
</td>
<td width="18%">
spacefill atoms
</td>
<td width="3%" align="right">
<input value="checkbox" script_selected="script:nativescript:plugin:1:select not hydrogen; hbonds 0.2;" script_deselected="script:nativescript:plugin:1:select not hydrogen; hbonds off;" name="checkbox-h" type="checkbox">
</td>
<td width="19%">
H-bonds
</td>
<td width="3%" align="right">
<input value="radio" script="script:nativescript:plugin:1:set echo off; select :I; color purple; select :j; color gold; select not hydrogen" name="RadioGroup1" type="radio">
</td>
<td width="19%">
strands
</td>
<td width="3%">
 
</td>
<td width="31%" align="right">
 
</td>
</tr>
<tr>
<td align="right">
<input value="radio" script="script:nativescript:plugin:1:script all-off.spt; wireframe 0.22" name="RadioGroup0" type="radio">
</td>
<td>
sticks
</td>
<td align="right">
<input checked="checked" value="checkbox" script_selected="script:nativescript:plugin:1:exit; select not hydrogen; labels off; display displayed or :I; refresh;" script_deselected="script:nativescript:plugin:1:exit; select not hydrogen; labels off; display displayed and not :I; refresh;" name="checkbox-s1" type="checkbox">
</td>
<td>
strand 1
</td>
<td align="right">
<input value="radio" script="script:nativescript:plugin:1:set echo off; select base; color tan;
select backbone; color teal" name="RadioGroup1" type="radio">
</td>
<td>
base/backbone
</td>
<td valign="top" rowspan="3" align="right">
<input value="checkbox" script_selected="script:nativescript:plugin:1:set picking center" script_deselected="script:jmol:1:set picking ident" name="checkbox" type="checkbox">
</td>
<td valign="top" rowspan="3" align="left">
click on an atom<br>to center it (Then un-check when done).
</td>
</tr>
<tr>
<td align="right">
<input value="radio" script="script:nativescript:plugin:1:script all-off.spt; wireframe 0.22; cpk 0.45" name="RadioGroup0" type="radio">
</td>
<td>
ball & stick
</td>
<td align="right">
<input checked="checked" value="checkbox" script_selected="script:nativescript:plugin:1:exit; select not hydrogen; labels off; display displayed or :J; refresh;" script_deselected="script:nativescript:plugin:1:exit; select not hydrogen; labels off; display displayed and not :J; refresh;" name="checkbox-s2" type="checkbox">
</td>
<td>
strand 2
</td>
<td align="right">
<input value="radio" script="script:nativescript:plugin:1:set echo off; select [A]; color blue; select [T]; color yellow; select [G]; color green; select [C]; color red; select not hydrogen; set echo KeyEcho 0% 100%; font echo 14 sans bold; color echo black; echo Color key:; set echo Aecho 1% 87%; color echo blue; font echo 18 sans bold; echo A; set echo Cecho 3% 87%; color echo red; font echo 18 sans bold; echo C; set echo Decho 5% 87%; color echo green; font echo 18 sans bold; echo G; set echo Techo 7% 87%; color echo yellow; font echo 18 sans bold; echo T;" name="RadioGroup1" type="radio">
</td>
<td>
bases (A,C,G,T)
</td>
</tr>
<tr>
<td align="right">
<input value="radio" script="script:nativescript:plugin:1:script all-off.spt; cartoon on; select bases and not hydrogen; wireframe 0.2; select not hydrogen" name="RadioGroup0" type="radio">
</td>
<td>
ladder
</td>
<td align="right">
<input value="checkbox" script_selected="script:nativescript:plugin:1:exit; set echo off; isosurface on;" script_deselected="script:nativescript:plugin:1:exit; isosurface off;" name="checkbox-s22" type="checkbox">
</td>
<td>
surface
</td>
<td align="right">
<input checked="checked" value="radio" script="script:nativescript:plugin:1:set echo off; select not hydrogen; color cpk; set echo KeyEcho 0% 100%; font echo 14 sans bold; color echo black; echo Color key:; set echo Carbonecho 1% 87%; color echo gray; font echo 18 sans bold; echo C; set echo oxyEcho 3% 87%; color echo [xff3233]; font echo 18 sans bold; echo O; set echo nitroEcho 5% 87%; color echo [xc0baff]; font echo 18 sans bold; echo N; set echo phosEcho 7% 87%; color echo [xfdc33e]; font echo 18 sans bold; echo P;" name="RadioGroup1" type="radio">
</td>
<td>
elements
</td>
</tr>
</table>
</body>
</html>
-333301
Raised Bevel
1
org.concord.modeler.PageJContainer
JmolApplet.jar
netscape.jar
org.jmol.applet.MwPlugin
doublehelix$plugin$0.aps{name="load" value="dna1.pdb"}
{name="nostatepersistence" value="true"}
{name="script" value="script dna.spt"}
700350
Raised Etchedhttp://mw2.concord.org/public/plugin/dna.spt, all-off.spt, dna.jvxl
10